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FunSy team @UniStra – Dynamic complexity as a resource for brain functional computations (experiment, modelling, data analysis)
Principal Investigators

Romain Goutagny
CNRS research director
Rodent electrophysiology and behavior, hippocampus, oscillations, memory…

Demian Battaglia
CNRS research scientist
Computational modelling, oscillations, network and information theory…

Jyotika Bahuguna
UniStra tenure track professor
Computational and statistical modeling, basal ganglia, decision making, oscillations…

Yaroslav Sych
CNRS tenure track professor
Calcium imaging, neuromodulation, distributed neural circuits, fiber sensors…
Taming (rather than ignoring) the complexity of neural dynamics
We consider micro-, meso- and macro-scale brain circuits as dynamical systems that collectively produce functional computations and, ultimately, cognition and behavior. Here, the keyword is “collectively”, and, briefly, we could say that “the whole is more (and different) than the sum of the parts”. Analogously, pathologies are usually interpreted in terms of damage to system’s parts (“hardware”), while they may, especially in early stages, build-up from alterations of system’s dynamics (“software”).
We combine data collection with state-of-the-art experimental techniques (R. Goutagny) with sophisticated analytical tools including machine-learning, information theory, network science and computational modeling (D. Battaglia, J. Bahuguna), all conducted at different spatial and temporal scales, to dissect the potential cognitive algorithms mediated by neural oscillations and other neural dynamics patterns. The cross-fertilization between theory and experiments is central in our research. In our agnostic approaches, we try refraining from averaging over long times and many trials, as we believe that fluctuations are not mere noise, but that their spatiotemporal organization and non-linearities conveys rich information which can be revealed without a priori assumptions. We thus naturally focus on phenomena such as oscillatory bursting, cross-frequency coupling, dynamic functional connectivity and switching between states. We adapt our analysis and modelling approaches to very different types of neural signals, from single units and LFPs to brain-wide EEG and fMRI (human, NHP, rodent, cultures…).
We aim at understanding how coordinated neural dynamics mediate information processing relevant to behavior, memory and attention, decision making and sensorimotor coordination functions (with an election focus on hippocampal, cortical and basal ganglia networks). We also aim at identifying how alterations of dynamics translate into functional improvement (e.g. along task learning and development) or functional impairments (e.g. in neurodegenerative diseases or other brain disorders). The dream is to design interventions that would preserve/rescue function by “repairing dynamics” and functional connectivity.
Highlights

Oscillatory power and coherence are not stationary, but wildly fluctuate in intensity, frequency and phase. We isolate oscillatory events and show that they individually convey decodable information and that their coordination mediates routing and other primitive info-processing operations.

Brain rhythms and, particularly, hippocampal rhythms are nonlinearly interacting. Learning of a navigation target increases theta-gamma coupling more than it affects the two rhythms individually. Enhanced coordination may be a mechanism for enhanced behavioral and cognitive performance.

Functional networks, tracking coordination between neurons or local populations, evolves flexibly in time, in a way which is neither ordered, nor completely disordered. We develop multi-scale metrics of system’s reconfiguration which correlate with cognitive function (and its developmental or pathological changes).

Computational models are useful abstractions to probe (or reverse-engineer) circuit mechanisms, to engender new hypotheses and to extrapolate unexpected consequences of familiar scenarios. We use both spiking and mean-field models, from local micro-circuits up to whole virtual brains.
Science and news
Phase-dependent brain stimulation: why dynamic functional connectivity matters
Brain stimulation is increasingly used to modulate neural activity, with applications ranging from basic neuroscience to clinical interventions in epilepsy, depression, Parkinson’s disease, and disorders of consciousness. Yet one major challenge remains: the same stimulation can sometimes produce different effects depending on when it is delivered. This suggests that the brain is not a passive…
Detecting conscious perception in preverbal infants through Event Related Variability
A major challenge in developmental cognitive neuroscience is that preverbal infants cannot tell us what they perceive. This is especially difficult when studying conscious perception: how can we know whether an infant actually saw a stimulus, rather than merely processed it unconsciously? In this study, led by François Leroy and Ghislaine Dehaene at NeuroSpin, Saclay,…
How basal ganglia subnetworks tune decision policies to increase reward rate
Adaptive decision-making is not only about choosing the correct option. It also requires choosing at the right speed. In uncertain environments, the brain must continuously manage the trade-off between accuracy and reaction time: waiting longer can improve decisions, but waiting too long may reduce reward rate. How cortico-basal ganglia-thalamic (CBGT) circuits learn to tune this…
Optimal inhibitory-to-excitatory balance for flexible brain communication
Neural oscillations are among the brain’s main strategies for coordinating activity across cells and circuits. Different frequency bands are often associated with different computational roles: slower rhythms can support long-range coordination, while faster rhythms such as gamma are thought to help structure local processing and information transfer. Yet an important question remains open: how can…
40 Hz light stimulation restores brain dynamics and memory in an early Alzheimer’s disease mouse model
Alzheimer’s disease is often described in terms of its “hardware” damage: amyloid plaques, tau pathology, neuronal loss, and progressive structural degeneration. But before the brain is visibly damaged, its activity may already be changing. In this study, we asked whether early Alzheimer-like alterations could be detected not only in brain structure, but in brain dynamics…
L-Dopa reshapes aperiodic brain bursts in Parkinson’s disease
Parkinson’s disease is classically associated with abnormal rhythmic activity in cortico-basal ganglia circuits, especially excessive beta-band synchronization. Yet brain activity is not made only of regular oscillations. It also contains brief, irregular, aperiodic bursts that propagate across regions and may reflect the brain’s capacity to flexibly coordinate distributed activity. In this study, in collaboration with…
What if all these different oscillations where entangled in a network of interdependence?
Linking neural activity to sensory, motor or cognitive processes is an ongoing goal in Neuroscience and articular attention has been devoted to the role of brain oscillations, analyzed by averaging over many trials in suitably designed tasks. Previous findings offer a glimpse of the complexity of the overall picture, but have also limitations. First, searching…
CBGTPy: a flexible virtual laboratory for biological decision-making
Decision-making depends on the coordinated activity of cortico-basal ganglia-thalamic circuits. These circuits help the brain evaluate alternatives, select actions, suppress inappropriate responses, and learn from reward. Yet they are difficult to study because behavior emerges from interactions between many pathways, timescales, and cell populations. CBGTPy was developed to make these interactions easier to model, manipulate,…
Now my own suspicion is that theuniversebrain is not only queerer than we suppose, but queerer than we can suppose.
J.B.S. Haldane, froM Possible Worlds and Other Papers (1927, with a small change 😉 )
About us
The Functional System’s Dynamics team is an emergent team of the Laboratory for Cognitive and Adaptive Neuroscience (CNRS UMR 7364), within the Interdisciplinary Thematic Institute “NeuroStra” at University of Strasbourg, member of the trinational Neuroscience Upper Rhine network (NEUREX). The team was kickstarted thanks to the support of the University of Strasbourg Institute of Advanced Studies (USIAS).
How to find us
We are located within the building of the Faculty of Psychology, at the ground floor (LNCA wing, to the right, end of the corridor, entering from Rue Goethe side).
LNCA – 12 rue Goethe, F-67000 STRASBOURG
Tramway lines C/E/F – stop « Université » – Bus line 2 (~15 min from central station) – Strasbourg Entzheim airport at ~40 min, high speed train to Paris CDG and Frankfurt / Main international hubs.




